Geneious
Geneious is an integrated bioinformatics tool suite for manipulating, finding, sharing, and exploring biological data such as linear and circular DNA sequences, proteins, phylogenies, chromatograms, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, restriction analysis, contig assembly, access to biological databases at NCBI and elsewhere (PubMed, Nucleotide, PopSet, SNP, Structure, PFAM, etc.), BLAST, and more. It includes an API for creating your own plugins.
| Tags | education Scientific/Engineering Bioinformatics Mathematics Visualization |
|---|---|
| Operating Systems | Windows Windows Windows POSIX Solaris Mac OS X Windows Windows Unix |
| Implementation | Java |
Recent releases
- 21 Apr 2009 08:52
Changes: This is a patch release.
- 01 Apr 2009 15:53
Changes: Major feature enhancements include Gateway Cloning, an improved Vector NTI database importer, sequence assembly by name, Sanger GFF import and export, and many small usability improvements and bugfixes.
- 13 Mar 2009 22:09
Changes: This release fixes incorrect genomes being downloaded due to NCBI changing their format, and allows updating the location of the NCBI server.
- 28 Jan 2009 23:47
Changes: This release fixes a couple of small bugs, including crash and performance bugs when assembling and viewing contigs.
- 23 Dec 2008 09:10
Changes: New features added in the Pro version only include Unified Sequence Search, a new BLAST searching interface including batch searching and improved handling of results, a new 3D Structure Viewer, the ability to select parts of a structure and modify their appearance individually, and real-time Restriction Analysis and ORFs. Find restriction sites and ORFs are now part of the Sequence View, allowing real-time updating of sites as options are changed. A new color scheme where colors reside in an alignment according to similarity was implemented.
